Cluster: HRGMv2_2363_CGC22
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2363
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2363_48 | HRGMv2_2363_48_3 | 3378 | 4436 | + | GT2 |
| TC | HRGMv2_2363_48 | HRGMv2_2363_48_4 | 4533 | 5987 | + | 2.A.66.2.23 |
| pfam | HRGMv2_2363_48 | HRGMv2_2363_48_5 | 6080 | 7279 | + | ATP-grasp_3 | CPSase_L_D2 | ATPgrasp_Ter | PylC-like_N |
| STP | HRGMv2_2363_48 | HRGMv2_2363_48_6 | 7276 | 8400 | + | Aminotran_1_2 |
| CAZyme | HRGMv2_2363_48 | HRGMv2_2363_48_7 | 8397 | 9110 | + | GT2 |
| NULL(UNKNOWN) | HRGMv2_2363_48 | HRGMv2_2363_48_8 | 9113 | 10411 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2363_48 | HRGMv2_2363_48_9 | 10401 | 11345 | + | GT2 |
Gene ID: HRGMv2_2363_48_3
Type: CAZyme
Location: 3378 - 4436 (+)
Type: CAZyme
Location: 3378 - 4436 (+)
Gene ID: HRGMv2_2363_48_4
Type: TC
Location: 4533 - 5987 (+)
Type: TC
Location: 4533 - 5987 (+)
Gene ID: HRGMv2_2363_48_5
Type: pfam
Location: 6080 - 7279 (+)
Type: pfam
Location: 6080 - 7279 (+)
Gene ID: HRGMv2_2363_48_6
Type: STP
Location: 7276 - 8400 (+)
Type: STP
Location: 7276 - 8400 (+)
Gene ID: HRGMv2_2363_48_7
Type: CAZyme
Location: 8397 - 9110 (+)
Type: CAZyme
Location: 8397 - 9110 (+)
Gene ID: HRGMv2_2363_48_8
Type:
Location: 9113 - 10411 (+)
Type:
Location: 9113 - 10411 (+)
Gene ID: HRGMv2_2363_48_9
Type: CAZyme
Location: 10401 - 11345 (+)
Type: CAZyme
Location: 10401 - 11345 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Brotaphodocola
Species
Brotaphodocola sp003506385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2363_48_3 | vegetarian > omnivore | 1.19161 | 0.01681 |