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Cluster: HRGMv2_2363_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2363_39 HRGMv2_2363_39_10 9868 10611 - 3.A.1.3.20
TC HRGMv2_2363_39 HRGMv2_2363_39_11 10614 11405 - 3.A.1.3.20
TC HRGMv2_2363_39 HRGMv2_2363_39_12 11536 12432 - 3.A.1.3.20
peptidase HRGMv2_2363_39 HRGMv2_2363_39_13 12637 14742 - C82.UPA
peptidase HRGMv2_2363_39 HRGMv2_2363_39_14 14859 16262 - C82.001
TC HRGMv2_2363_39 HRGMv2_2363_39_15 16442 17374 - 2.A.19.5.2
pfam HRGMv2_2363_39 HRGMv2_2363_39_16 17774 18622 - SseB
CAZyme HRGMv2_2363_39 HRGMv2_2363_39_17 18828 20330 - GH77
pfam HRGMv2_2363_39 HRGMv2_2363_39_18 20346 21197 - Exo_endo_phos
TC HRGMv2_2363_39 HRGMv2_2363_39_19 21275 23590 - 4.A.1.1.11
Gene ID: HRGMv2_2363_39_10
Type: TC
Location: 9868 - 10611 (-)
Gene ID: HRGMv2_2363_39_11
Type: TC
Location: 10614 - 11405 (-)
Gene ID: HRGMv2_2363_39_12
Type: TC
Location: 11536 - 12432 (-)
Gene ID: HRGMv2_2363_39_13
Type: peptidase
Location: 12637 - 14742 (-)
Gene ID: HRGMv2_2363_39_14
Type: peptidase
Location: 14859 - 16262 (-)
Gene ID: HRGMv2_2363_39_15
Type: TC
Location: 16442 - 17374 (-)
Gene ID: HRGMv2_2363_39_16
Type: pfam
Location: 17774 - 18622 (-)
Gene ID: HRGMv2_2363_39_17
Type: CAZyme
Location: 18828 - 20330 (-)
Gene ID: HRGMv2_2363_39_18
Type: pfam
Location: 20346 - 21197 (-)
Gene ID: HRGMv2_2363_39_19
Type: TC
Location: 21275 - 23590 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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