Cluster: HRGMv2_2363_CGC16
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2363
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2363_24 | HRGMv2_2363_24_19 | 14124 | 15785 | + | GH18 |
| pfam | HRGMv2_2363_24 | HRGMv2_2363_24_20 | 15832 | 17385 | + | Metallophos | CNP_C_terminal |
| pfam | HRGMv2_2363_24 | HRGMv2_2363_24_21 | 17496 | 18197 | + | Amidase_3 |
| TC | HRGMv2_2363_24 | HRGMv2_2363_24_22 | 18592 | 19230 | + | 2.A.87.1.3 |
Gene ID: HRGMv2_2363_24_19
Type: CAZyme
Location: 14124 - 15785 (+)
Type: CAZyme
Location: 14124 - 15785 (+)
Gene ID: HRGMv2_2363_24_20
Type: pfam
Location: 15832 - 17385 (+)
Type: pfam
Location: 15832 - 17385 (+)
Gene ID: HRGMv2_2363_24_21
Type: pfam
Location: 17496 - 18197 (+)
Type: pfam
Location: 17496 - 18197 (+)
Gene ID: HRGMv2_2363_24_22
Type: TC
Location: 18592 - 19230 (+)
Type: TC
Location: 18592 - 19230 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Brotaphodocola
Species
Brotaphodocola sp003506385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.