Cluster: HRGMv2_2363_CGC14
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2363
- CGC Family ID: CGCFAM_01414
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2363_18 | HRGMv2_2363_18_5 | 3927 | 4613 | + | 3.A.1.140.1 |
| pfam | HRGMv2_2363_18 | HRGMv2_2363_18_6 | 4576 | 5511 | + | FtsX | FtsX_ECD |
| STP | HRGMv2_2363_18 | HRGMv2_2363_18_7 | 5514 | 6833 | + | Peptidase_M23 |
| TC | HRGMv2_2363_18 | HRGMv2_2363_18_8 | 6863 | 8203 | + | 9.B.174.1.2 |
| CAZyme | HRGMv2_2363_18 | HRGMv2_2363_18_9 | 8463 | 9209 | + | CE14 |
Gene ID: HRGMv2_2363_18_5
Type: TC
Location: 3927 - 4613 (+)
Type: TC
Location: 3927 - 4613 (+)
Gene ID: HRGMv2_2363_18_6
Type: pfam
Location: 4576 - 5511 (+)
Type: pfam
Location: 4576 - 5511 (+)
Gene ID: HRGMv2_2363_18_7
Type: STP
Location: 5514 - 6833 (+)
Type: STP
Location: 5514 - 6833 (+)
Gene ID: HRGMv2_2363_18_8
Type: TC
Location: 6863 - 8203 (+)
Type: TC
Location: 6863 - 8203 (+)
Gene ID: HRGMv2_2363_18_9
Type: CAZyme
Location: 8463 - 9209 (+)
Type: CAZyme
Location: 8463 - 9209 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Brotaphodocola
Species
Brotaphodocola sp003506385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.