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Cluster: HRGMv2_2363_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2363_7 HRGMv2_2363_7_43 35481 36203 - 3.A.1.3.15
TC HRGMv2_2363_7 HRGMv2_2363_7_44 36187 36855 - 3.A.1.3.15
TC HRGMv2_2363_7 HRGMv2_2363_7_45 36876 37760 - 3.A.1.3.15
CAZyme HRGMv2_2363_7 HRGMv2_2363_7_46 38093 38962 + CE4
CAZyme HRGMv2_2363_7 HRGMv2_2363_7_47 38959 39795 + CE4
pfam HRGMv2_2363_7 HRGMv2_2363_7_48 39788 41182 + MatE | MatE
STP HRGMv2_2363_7 HRGMv2_2363_7_49 41195 41779 + TetR_N
TC HRGMv2_2363_7 HRGMv2_2363_7_50 42301 43836 + 2.A.21.2.5
pfam HRGMv2_2363_7 HRGMv2_2363_7_51 44172 44486 + Ammonium_transp | Ammonium_transp
TF HRGMv2_2363_7 HRGMv2_2363_7_52 44649 45551 + HTH_1
TC HRGMv2_2363_7 HRGMv2_2363_7_53 45754 47382 + 3.A.1.5.3
TC HRGMv2_2363_7 HRGMv2_2363_7_54 47510 48451 + 3.A.1.5.3
TC HRGMv2_2363_7 HRGMv2_2363_7_55 48454 49275 + 3.A.1.5.43
TC HRGMv2_2363_7 HRGMv2_2363_7_56 49279 50217 + 3.A.1.5.43
TC HRGMv2_2363_7 HRGMv2_2363_7_57 50211 51041 + 3.A.1.5.43
pfam HRGMv2_2363_7 HRGMv2_2363_7_58 51074 52150 + AstE_AspA_cat
TC HRGMv2_2363_7 HRGMv2_2363_7_59 52190 53506 - 2.A.101.1.1
Gene ID: HRGMv2_2363_7_43
Type: TC
Location: 35481 - 36203 (-)
Gene ID: HRGMv2_2363_7_44
Type: TC
Location: 36187 - 36855 (-)
Gene ID: HRGMv2_2363_7_45
Type: TC
Location: 36876 - 37760 (-)
Gene ID: HRGMv2_2363_7_46
Type: CAZyme
Location: 38093 - 38962 (+)
Gene ID: HRGMv2_2363_7_47
Type: CAZyme
Location: 38959 - 39795 (+)
Gene ID: HRGMv2_2363_7_48
Type: pfam
Location: 39788 - 41182 (+)
Gene ID: HRGMv2_2363_7_49
Type: STP
Location: 41195 - 41779 (+)
Gene ID: HRGMv2_2363_7_50
Type: TC
Location: 42301 - 43836 (+)
Gene ID: HRGMv2_2363_7_51
Type: pfam
Location: 44172 - 44486 (+)
Gene ID: HRGMv2_2363_7_52
Type: TF
Location: 44649 - 45551 (+)
Gene ID: HRGMv2_2363_7_53
Type: TC
Location: 45754 - 47382 (+)
Gene ID: HRGMv2_2363_7_54
Type: TC
Location: 47510 - 48451 (+)
Gene ID: HRGMv2_2363_7_55
Type: TC
Location: 48454 - 49275 (+)
Gene ID: HRGMv2_2363_7_56
Type: TC
Location: 49279 - 50217 (+)
Gene ID: HRGMv2_2363_7_57
Type: TC
Location: 50211 - 51041 (+)
Gene ID: HRGMv2_2363_7_58
Type: pfam
Location: 51074 - 52150 (+)
Gene ID: HRGMv2_2363_7_59
Type: TC
Location: 52190 - 53506 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2363_7_57 vegetarian > omnivore 1.07884 0.03064
HRGMv2_2363_7_59 vegetarian > vegan 1.13884 0.04047

🧭 Explore Read Mapping of CGC

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