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Cluster: HRGMv2_2337_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2337_40 HRGMv2_2337_40_2 1598 3043 + 8.A.59.2.1
TC HRGMv2_2337_40 HRGMv2_2337_40_3 3224 4336 + 3.A.1.2.14
TC HRGMv2_2337_40 HRGMv2_2337_40_4 4432 5955 + 3.A.1.2.23
TC HRGMv2_2337_40 HRGMv2_2337_40_5 5945 7015 + 3.A.1.2.25
TC HRGMv2_2337_40 HRGMv2_2337_40_6 7012 8028 + 3.A.1.2.14
TC HRGMv2_2337_40 HRGMv2_2337_40_7 8122 9150 + 3.A.1.2.14
CAZyme HRGMv2_2337_40 HRGMv2_2337_40_8 9282 10427 + CBM50
Gene ID: HRGMv2_2337_40_2
Type: TC
Location: 1598 - 3043 (+)
Gene ID: HRGMv2_2337_40_3
Type: TC
Location: 3224 - 4336 (+)
Gene ID: HRGMv2_2337_40_4
Type: TC
Location: 4432 - 5955 (+)
Gene ID: HRGMv2_2337_40_5
Type: TC
Location: 5945 - 7015 (+)
Gene ID: HRGMv2_2337_40_6
Type: TC
Location: 7012 - 8028 (+)
Gene ID: HRGMv2_2337_40_7
Type: TC
Location: 8122 - 9150 (+)
Gene ID: HRGMv2_2337_40_8
Type: CAZyme
Location: 9282 - 10427 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
Hominiventricola
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2337_40_3 vegetarian > omnivore 1.80548 0.03201
HRGMv2_2337_40_3 vegetarian > vegan 1.71434 0.00863
HRGMv2_2337_40_4 vegan > omnivore 1.07728 0.03783

🧭 Explore Read Mapping of CGC

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