Cluster: HRGMv2_2337_CGC5
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2337
- CGC Family ID: CGCFAM_00007
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2337_32 | HRGMv2_2337_32_2 | 1759 | 3111 | + | 9.B.18.1.3 |
| CAZyme | HRGMv2_2337_32 | HRGMv2_2337_32_3 | 3104 | 4366 | + | GT4 |
| CAZyme | HRGMv2_2337_32 | HRGMv2_2337_32_4 | 4350 | 6029 | + | PL12 |
| pfam | HRGMv2_2337_32 | HRGMv2_2337_32_5 | 6022 | 7245 | + | UDPG_MGDP_dh | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N |
| pfam | HRGMv2_2337_32 | HRGMv2_2337_32_6 | 7226 | 9412 | + | GFO_IDH_MocA | GFO_IDH_MocA_C | GFO_IDH_MocA_C3 |
| CAZyme | HRGMv2_2337_32 | HRGMv2_2337_32_7 | 9393 | 10382 | + | GT4 |
Gene ID: HRGMv2_2337_32_2
Type: TC
Location: 1759 - 3111 (+)
Type: TC
Location: 1759 - 3111 (+)
Gene ID: HRGMv2_2337_32_3
Type: CAZyme
Location: 3104 - 4366 (+)
Type: CAZyme
Location: 3104 - 4366 (+)
Gene ID: HRGMv2_2337_32_4
Type: CAZyme
Location: 4350 - 6029 (+)
Type: CAZyme
Location: 4350 - 6029 (+)
Gene ID: HRGMv2_2337_32_5
Type: pfam
Location: 6022 - 7245 (+)
Type: pfam
Location: 6022 - 7245 (+)
Gene ID: HRGMv2_2337_32_6
Type: pfam
Location: 7226 - 9412 (+)
Type: pfam
Location: 7226 - 9412 (+)
Gene ID: HRGMv2_2337_32_7
Type: CAZyme
Location: 9393 - 10382 (+)
Type: CAZyme
Location: 9393 - 10382 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hominiventricola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.