Cluster: HRGMv2_2337_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2337
- CGC Family ID: CGCFAM_08269
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2337_31 | HRGMv2_2337_31_2 | 1195 | 2868 | - | GH13_31 |
| pfam | HRGMv2_2337_31 | HRGMv2_2337_31_3 | 2990 | 4585 | - | FGGY_N | FGGY_C |
| CAZyme | HRGMv2_2337_31 | HRGMv2_2337_31_4 | 4754 | 6808 | - | GH13_39 |
| TC | HRGMv2_2337_31 | HRGMv2_2337_31_5 | 7081 | 8904 | - | 3.A.16.1.1 |
Gene ID: HRGMv2_2337_31_2
Type: CAZyme
Location: 1195 - 2868 (-)
Type: CAZyme
Location: 1195 - 2868 (-)
Gene ID: HRGMv2_2337_31_3
Type: pfam
Location: 2990 - 4585 (-)
Type: pfam
Location: 2990 - 4585 (-)
Gene ID: HRGMv2_2337_31_4
Type: CAZyme
Location: 4754 - 6808 (-)
Type: CAZyme
Location: 4754 - 6808 (-)
Gene ID: HRGMv2_2337_31_5
Type: TC
Location: 7081 - 8904 (-)
Type: TC
Location: 7081 - 8904 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hominiventricola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.