Cluster: HRGMv2_2335_CGC9
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2335
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2335_7 | HRGMv2_2335_7_4 | 3000 | 4493 | - | GH77 |
| TC | HRGMv2_2335_7 | HRGMv2_2335_7_5 | 4521 | 5360 | - | 3.A.1.1.45 |
| TC | HRGMv2_2335_7 | HRGMv2_2335_7_6 | 5360 | 6202 | - | 3.A.1.1.45 |
| TC | HRGMv2_2335_7 | HRGMv2_2335_7_7 | 6352 | 7758 | - | 3.A.1.1.45 |
| CAZyme | HRGMv2_2335_7 | HRGMv2_2335_7_8 | 8141 | 10411 | - | GT35 |
Gene ID: HRGMv2_2335_7_4
Type: CAZyme
Location: 3000 - 4493 (-)
Type: CAZyme
Location: 3000 - 4493 (-)
Gene ID: HRGMv2_2335_7_5
Type: TC
Location: 4521 - 5360 (-)
Type: TC
Location: 4521 - 5360 (-)
Gene ID: HRGMv2_2335_7_6
Type: TC
Location: 5360 - 6202 (-)
Type: TC
Location: 5360 - 6202 (-)
Gene ID: HRGMv2_2335_7_7
Type: TC
Location: 6352 - 7758 (-)
Type: TC
Location: 6352 - 7758 (-)
Gene ID: HRGMv2_2335_7_8
Type: CAZyme
Location: 8141 - 10411 (-)
Type: CAZyme
Location: 8141 - 10411 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor sp934436435
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.