Cluster: HRGMv2_2335_CGC8
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2335
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2335_6 | HRGMv2_2335_6_1 | 3 | 1142 | - | GH13_44 |
| pfam | HRGMv2_2335_6 | HRGMv2_2335_6_2 | 1462 | 2211 | + | FRG |
| TC | HRGMv2_2335_6 | HRGMv2_2335_6_3 | 2340 | 3446 | + | 3.A.1.1.38 |
| TC | HRGMv2_2335_6 | HRGMv2_2335_6_4 | 3462 | 4355 | + | 3.A.1.1.34 |
| TC | HRGMv2_2335_6 | HRGMv2_2335_6_5 | 4373 | 5251 | + | 3.A.1.1.20 |
Gene ID: HRGMv2_2335_6_1
Type: CAZyme
Location: 3 - 1142 (-)
Type: CAZyme
Location: 3 - 1142 (-)
Gene ID: HRGMv2_2335_6_2
Type: pfam
Location: 1462 - 2211 (+)
Type: pfam
Location: 1462 - 2211 (+)
Gene ID: HRGMv2_2335_6_3
Type: TC
Location: 2340 - 3446 (+)
Type: TC
Location: 2340 - 3446 (+)
Gene ID: HRGMv2_2335_6_4
Type: TC
Location: 3462 - 4355 (+)
Type: TC
Location: 3462 - 4355 (+)
Gene ID: HRGMv2_2335_6_5
Type: TC
Location: 4373 - 5251 (+)
Type: TC
Location: 4373 - 5251 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor sp934436435
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.