Cluster: HRGMv2_2335_CGC44
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2335
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2335_78 | HRGMv2_2335_78_14 | 8525 | 10237 | + | CBM34 | GH13_20 |
| TC | HRGMv2_2335_78 | HRGMv2_2335_78_15 | 10234 | 11709 | + | 3.A.1.1.2 |
| TC | HRGMv2_2335_78 | HRGMv2_2335_78_16 | 11749 | 13095 | + | 3.A.1.1.27 |
| TC | HRGMv2_2335_78 | HRGMv2_2335_78_17 | 13092 | 13928 | + | 3.A.1.1.27 |
Gene ID: HRGMv2_2335_78_14
Type: CAZyme
Location: 8525 - 10237 (+)
Type: CAZyme
Location: 8525 - 10237 (+)
Gene ID: HRGMv2_2335_78_15
Type: TC
Location: 10234 - 11709 (+)
Type: TC
Location: 10234 - 11709 (+)
Gene ID: HRGMv2_2335_78_16
Type: TC
Location: 11749 - 13095 (+)
Type: TC
Location: 11749 - 13095 (+)
Gene ID: HRGMv2_2335_78_17
Type: TC
Location: 13092 - 13928 (+)
Type: TC
Location: 13092 - 13928 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor sp934436435
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.