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Cluster: HRGMv2_2335_CGC43

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2335_75 HRGMv2_2335_75_1 2 1546 - CBM48 | GH13_9
pfam HRGMv2_2335_75 HRGMv2_2335_75_2 1622 2863 - DUF1015
pfam HRGMv2_2335_75 HRGMv2_2335_75_3 3101 4153 - Lactonase
TC HRGMv2_2335_75 HRGMv2_2335_75_4 4426 5499 + 3.A.1.11.8
TC HRGMv2_2335_75 HRGMv2_2335_75_5 5492 6304 + 3.A.1.11.8
TC HRGMv2_2335_75 HRGMv2_2335_75_6 6301 7074 + 3.A.1.11.1
TC HRGMv2_2335_75 HRGMv2_2335_75_7 7109 8173 + 3.A.1.11.7
NULL(UNKNOWN) HRGMv2_2335_75 HRGMv2_2335_75_8 8233 8523 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_2335_75 HRGMv2_2335_75_9 8557 9132 - DUF5662
CAZyme HRGMv2_2335_75 HRGMv2_2335_75_10 9148 11067 - GH13_11
Gene ID: HRGMv2_2335_75_1
Type: CAZyme
Location: 2 - 1546 (-)
Gene ID: HRGMv2_2335_75_2
Type: pfam
Location: 1622 - 2863 (-)
Gene ID: HRGMv2_2335_75_3
Type: pfam
Location: 3101 - 4153 (-)
Gene ID: HRGMv2_2335_75_4
Type: TC
Location: 4426 - 5499 (+)
Gene ID: HRGMv2_2335_75_5
Type: TC
Location: 5492 - 6304 (+)
Gene ID: HRGMv2_2335_75_6
Type: TC
Location: 6301 - 7074 (+)
Gene ID: HRGMv2_2335_75_7
Type: TC
Location: 7109 - 8173 (+)
Gene ID: HRGMv2_2335_75_8
Type:
Location: 8233 - 8523 (-)
Gene ID: HRGMv2_2335_75_9
Type: pfam
Location: 8557 - 9132 (-)
Gene ID: HRGMv2_2335_75_10
Type: CAZyme
Location: 9148 - 11067 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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