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Cluster: HRGMv2_2335_CGC41

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2335_64 HRGMv2_2335_64_8 5133 6278 + GH25
pfam HRGMv2_2335_64 HRGMv2_2335_64_9 6474 6662 + ToxN_toxin
pfam HRGMv2_2335_64 HRGMv2_2335_64_10 7289 7798 - 4HBT
TC HRGMv2_2335_64 HRGMv2_2335_64_11 8052 8537 + 9.A.11.1.1
pfam HRGMv2_2335_64 HRGMv2_2335_64_12 8653 9279 + SporV_AA
peptidase HRGMv2_2335_64 HRGMv2_2335_64_13 9969 12104 - C11.UPA
TC HRGMv2_2335_64 HRGMv2_2335_64_14 12384 12926 + 9.A.11.1.1
pfam HRGMv2_2335_64 HRGMv2_2335_64_15 13128 14189 + Fe-ADH | Fe-ADH_2
TF HRGMv2_2335_64 HRGMv2_2335_64_16 14326 14838 + MarR
TC HRGMv2_2335_64 HRGMv2_2335_64_17 14908 16662 + 3.A.1.135.5
TC HRGMv2_2335_64 HRGMv2_2335_64_18 16662 18587 + 3.A.1.135.5
Gene ID: HRGMv2_2335_64_8
Type: CAZyme
Location: 5133 - 6278 (+)
Gene ID: HRGMv2_2335_64_9
Type: pfam
Location: 6474 - 6662 (+)
Gene ID: HRGMv2_2335_64_10
Type: pfam
Location: 7289 - 7798 (-)
Gene ID: HRGMv2_2335_64_11
Type: TC
Location: 8052 - 8537 (+)
Gene ID: HRGMv2_2335_64_12
Type: pfam
Location: 8653 - 9279 (+)
Gene ID: HRGMv2_2335_64_13
Type: peptidase
Location: 9969 - 12104 (-)
Gene ID: HRGMv2_2335_64_14
Type: TC
Location: 12384 - 12926 (+)
Gene ID: HRGMv2_2335_64_15
Type: pfam
Location: 13128 - 14189 (+)
Gene ID: HRGMv2_2335_64_16
Type: TF
Location: 14326 - 14838 (+)
Gene ID: HRGMv2_2335_64_17
Type: TC
Location: 14908 - 16662 (+)
Gene ID: HRGMv2_2335_64_18
Type: TC
Location: 16662 - 18587 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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