Cluster: HRGMv2_2335_CGC4
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2335
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2335_2 | HRGMv2_2335_2_60 | 77892 | 79604 | - | 9.B.34.1.3 |
| NULL(UNKNOWN) | HRGMv2_2335_2 | HRGMv2_2335_2_61 | 79688 | 80659 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_2335_2 | HRGMv2_2335_2_62 | 81017 | 81685 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2335_2 | HRGMv2_2335_2_63 | 81946 | 83295 | - | 1.A.26.1.2 |
| pfam | HRGMv2_2335_2 | HRGMv2_2335_2_64 | 83451 | 84098 | - | UPF0029 | DUF1949 |
| CAZyme | HRGMv2_2335_2 | HRGMv2_2335_2_65 | 84284 | 86956 | + | GT51 |
Gene ID: HRGMv2_2335_2_60
Type: TC
Location: 77892 - 79604 (-)
Type: TC
Location: 77892 - 79604 (-)
Gene ID: HRGMv2_2335_2_61
Type:
Location: 79688 - 80659 (-)
Type:
Location: 79688 - 80659 (-)
Gene ID: HRGMv2_2335_2_62
Type:
Location: 81017 - 81685 (-)
Type:
Location: 81017 - 81685 (-)
Gene ID: HRGMv2_2335_2_63
Type: TC
Location: 81946 - 83295 (-)
Type: TC
Location: 81946 - 83295 (-)
Gene ID: HRGMv2_2335_2_64
Type: pfam
Location: 83451 - 84098 (-)
Type: pfam
Location: 83451 - 84098 (-)
Gene ID: HRGMv2_2335_2_65
Type: CAZyme
Location: 84284 - 86956 (+)
Type: CAZyme
Location: 84284 - 86956 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor sp934436435
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.