Cluster: HRGMv2_2335_CGC31
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2335
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2335_38 | HRGMv2_2335_38_4 | 3100 | 4500 | + | 9.A.40.2.1 |
| peptidase | HRGMv2_2335_38 | HRGMv2_2335_38_5 | 4582 | 5310 | + | M20.UNW |
| CAZyme | HRGMv2_2335_38 | HRGMv2_2335_38_6 | 5334 | 6278 | + | GT2 |
| NULL(UNKNOWN) | HRGMv2_2335_38 | HRGMv2_2335_38_7 | 6278 | 7825 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| peptidase | HRGMv2_2335_38 | HRGMv2_2335_38_8 | 7967 | 8710 | + | S14.UPW |
| TC | HRGMv2_2335_38 | HRGMv2_2335_38_9 | 8792 | 11614 | + | 3.A.12.1.1 |
Gene ID: HRGMv2_2335_38_4
Type: TC
Location: 3100 - 4500 (+)
Type: TC
Location: 3100 - 4500 (+)
Gene ID: HRGMv2_2335_38_5
Type: peptidase
Location: 4582 - 5310 (+)
Type: peptidase
Location: 4582 - 5310 (+)
Gene ID: HRGMv2_2335_38_6
Type: CAZyme
Location: 5334 - 6278 (+)
Type: CAZyme
Location: 5334 - 6278 (+)
Gene ID: HRGMv2_2335_38_7
Type:
Location: 6278 - 7825 (+)
Type:
Location: 6278 - 7825 (+)
Gene ID: HRGMv2_2335_38_8
Type: peptidase
Location: 7967 - 8710 (+)
Type: peptidase
Location: 7967 - 8710 (+)
Gene ID: HRGMv2_2335_38_9
Type: TC
Location: 8792 - 11614 (+)
Type: TC
Location: 8792 - 11614 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor sp934436435
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.