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Cluster: HRGMv2_2335_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2335_36 HRGMv2_2335_36_23 27547 28503 - GT2
pfam HRGMv2_2335_36 HRGMv2_2335_36_24 28513 29103 - Acetyltransf_1 | Acetyltransf_3 | Acetyltransf_4 | Acetyltransf_8
STP HRGMv2_2335_36 HRGMv2_2335_36_25 29123 30229 - Aminotran_1_2
CAZyme HRGMv2_2335_36 HRGMv2_2335_36_26 30322 31047 - GT2
CAZyme HRGMv2_2335_36 HRGMv2_2335_36_27 31044 32003 - GT2
pfam HRGMv2_2335_36 HRGMv2_2335_36_28 32042 33172 - DAO | NAD_binding_8
pfam HRGMv2_2335_36 HRGMv2_2335_36_29 33165 34889 - DUF6020
CAZyme HRGMv2_2335_36 HRGMv2_2335_36_30 34891 35832 - GT2
TC HRGMv2_2335_36 HRGMv2_2335_36_31 35991 37688 + 9.B.142.3.8
Gene ID: HRGMv2_2335_36_23
Type: CAZyme
Location: 27547 - 28503 (-)
Gene ID: HRGMv2_2335_36_24
Type: pfam
Location: 28513 - 29103 (-)
Gene ID: HRGMv2_2335_36_25
Type: STP
Location: 29123 - 30229 (-)
Gene ID: HRGMv2_2335_36_26
Type: CAZyme
Location: 30322 - 31047 (-)
Gene ID: HRGMv2_2335_36_27
Type: CAZyme
Location: 31044 - 32003 (-)
Gene ID: HRGMv2_2335_36_28
Type: pfam
Location: 32042 - 33172 (-)
Gene ID: HRGMv2_2335_36_29
Type: pfam
Location: 33165 - 34889 (-)
Gene ID: HRGMv2_2335_36_30
Type: CAZyme
Location: 34891 - 35832 (-)
Gene ID: HRGMv2_2335_36_31
Type: TC
Location: 35991 - 37688 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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