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Cluster: HRGMv2_2335_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2335_32 HRGMv2_2335_32_15 10830 11765 + GT2
CAZyme HRGMv2_2335_32 HRGMv2_2335_32_16 11799 12728 + GT2
pfam HRGMv2_2335_32 HRGMv2_2335_32_17 12733 14127 + Wzy_C
NULL(UNKNOWN) HRGMv2_2335_32 HRGMv2_2335_32_18 14155 15321 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2335_32 HRGMv2_2335_32_19 15324 16499 + GT4
CAZyme HRGMv2_2335_32 HRGMv2_2335_32_20 16459 17454 + GT2
pfam HRGMv2_2335_32 HRGMv2_2335_32_21 17475 18317 + PS_pyruv_trans
TC HRGMv2_2335_32 HRGMv2_2335_32_22 18314 19894 + 2.A.66.1.40
Gene ID: HRGMv2_2335_32_15
Type: CAZyme
Location: 10830 - 11765 (+)
Gene ID: HRGMv2_2335_32_16
Type: CAZyme
Location: 11799 - 12728 (+)
Gene ID: HRGMv2_2335_32_17
Type: pfam
Location: 12733 - 14127 (+)
Gene ID: HRGMv2_2335_32_18
Type:
Location: 14155 - 15321 (+)
Gene ID: HRGMv2_2335_32_19
Type: CAZyme
Location: 15324 - 16499 (+)
Gene ID: HRGMv2_2335_32_20
Type: CAZyme
Location: 16459 - 17454 (+)
Gene ID: HRGMv2_2335_32_21
Type: pfam
Location: 17475 - 18317 (+)
Gene ID: HRGMv2_2335_32_22
Type: TC
Location: 18314 - 19894 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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