Cluster: HRGMv2_2335_CGC24
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2335
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2335_30 | HRGMv2_2335_30_2 | 1467 | 2432 | + | 9.B.146.1.3 |
| pfam | HRGMv2_2335_30 | HRGMv2_2335_30_3 | 2448 | 2948 | + | GreA_GreB | GreA_GreB_N |
| peptidase | HRGMv2_2335_30 | HRGMv2_2335_30_4 | 3021 | 4556 | + | G05.UPW |
| CAZyme | HRGMv2_2335_30 | HRGMv2_2335_30_5 | 4816 | 5619 | + | GT2 |
Gene ID: HRGMv2_2335_30_2
Type: TC
Location: 1467 - 2432 (+)
Type: TC
Location: 1467 - 2432 (+)
Gene ID: HRGMv2_2335_30_3
Type: pfam
Location: 2448 - 2948 (+)
Type: pfam
Location: 2448 - 2948 (+)
Gene ID: HRGMv2_2335_30_4
Type: peptidase
Location: 3021 - 4556 (+)
Type: peptidase
Location: 3021 - 4556 (+)
Gene ID: HRGMv2_2335_30_5
Type: CAZyme
Location: 4816 - 5619 (+)
Type: CAZyme
Location: 4816 - 5619 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor sp934436435
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.