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Cluster: HRGMv2_2335_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2335_25 HRGMv2_2335_25_1 3 2156 + 2.A.6.4.2
pfam HRGMv2_2335_25 HRGMv2_2335_25_2 2505 3695 + CBM26 | CBM26 | CBM26
TC HRGMv2_2335_25 HRGMv2_2335_25_3 3749 5008 + 3.A.1.1.16
TC HRGMv2_2335_25 HRGMv2_2335_25_4 5022 5915 + 3.A.1.1.2
TC HRGMv2_2335_25 HRGMv2_2335_25_5 5912 6754 + 3.A.1.1.2
CAZyme HRGMv2_2335_25 HRGMv2_2335_25_6 6773 8518 + CBM34 | GH13_20
Gene ID: HRGMv2_2335_25_1
Type: TC
Location: 3 - 2156 (+)
Gene ID: HRGMv2_2335_25_2
Type: pfam
Location: 2505 - 3695 (+)
Gene ID: HRGMv2_2335_25_3
Type: TC
Location: 3749 - 5008 (+)
Gene ID: HRGMv2_2335_25_4
Type: TC
Location: 5022 - 5915 (+)
Gene ID: HRGMv2_2335_25_5
Type: TC
Location: 5912 - 6754 (+)
Gene ID: HRGMv2_2335_25_6
Type: CAZyme
Location: 6773 - 8518 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2335_25_2 vegetarian > vegan 1.40334 0.00364
HRGMv2_2335_25_6 vegetarian > vegan 1.00156 0.00364

🧭 Explore Read Mapping of CGC

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