Cluster: HRGMv2_2335_CGC20
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2335
- CGC Family ID: CGCFAM_00054
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2335_23 | HRGMv2_2335_23_12 | 11643 | 14099 | + | GH2 |
| TC | HRGMv2_2335_23 | HRGMv2_2335_23_13 | 14140 | 15507 | + | 2.A.2.1.1 |
| CAZyme | HRGMv2_2335_23 | HRGMv2_2335_23_14 | 15504 | 17900 | + | GH36 |
| pfam | HRGMv2_2335_23 | HRGMv2_2335_23_15 | 18156 | 18605 | - | Tyr_Deacylase |
| TC | HRGMv2_2335_23 | HRGMv2_2335_23_16 | 18605 | 19945 | - | 2.A.86.1.8 |
Gene ID: HRGMv2_2335_23_12
Type: CAZyme
Location: 11643 - 14099 (+)
Type: CAZyme
Location: 11643 - 14099 (+)
Gene ID: HRGMv2_2335_23_13
Type: TC
Location: 14140 - 15507 (+)
Type: TC
Location: 14140 - 15507 (+)
Gene ID: HRGMv2_2335_23_14
Type: CAZyme
Location: 15504 - 17900 (+)
Type: CAZyme
Location: 15504 - 17900 (+)
Gene ID: HRGMv2_2335_23_15
Type: pfam
Location: 18156 - 18605 (-)
Type: pfam
Location: 18156 - 18605 (-)
Gene ID: HRGMv2_2335_23_16
Type: TC
Location: 18605 - 19945 (-)
Type: TC
Location: 18605 - 19945 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor sp934436435
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.