dbCAN Logo

Cluster: HRGMv2_2335_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2335_22 HRGMv2_2335_22_21 16377 17735 + 1.A.26.1.1
TF HRGMv2_2335_22 HRGMv2_2335_22_22 17763 18101 - 0042546
NULL(UNKNOWN) HRGMv2_2335_22 HRGMv2_2335_22_23 18158 18448 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2335_22 HRGMv2_2335_22_24 18639 19436 + 8.A.5.1.4
pfam HRGMv2_2335_22 HRGMv2_2335_22_25 19526 20392 + AP_endonuc_2
CAZyme HRGMv2_2335_22 HRGMv2_2335_22_26 20694 25286 + CBM23 | CBM27 | GH26
TC HRGMv2_2335_22 HRGMv2_2335_22_27 25343 26788 - 2.A.38.1.1
TC HRGMv2_2335_22 HRGMv2_2335_22_28 26794 28152 - 2.A.38.1.1
TC HRGMv2_2335_22 HRGMv2_2335_22_29 28292 29203 + 9.B.70.1.1
Gene ID: HRGMv2_2335_22_21
Type: TC
Location: 16377 - 17735 (+)
Gene ID: HRGMv2_2335_22_22
Type: TF
Location: 17763 - 18101 (-)
Gene ID: HRGMv2_2335_22_23
Type:
Location: 18158 - 18448 (+)
Gene ID: HRGMv2_2335_22_24
Type: TC
Location: 18639 - 19436 (+)
Gene ID: HRGMv2_2335_22_25
Type: pfam
Location: 19526 - 20392 (+)
Gene ID: HRGMv2_2335_22_26
Type: CAZyme
Location: 20694 - 25286 (+)
Gene ID: HRGMv2_2335_22_27
Type: TC
Location: 25343 - 26788 (-)
Gene ID: HRGMv2_2335_22_28
Type: TC
Location: 26794 - 28152 (-)
Gene ID: HRGMv2_2335_22_29
Type: TC
Location: 28292 - 29203 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List