Cluster: HRGMv2_2335_CGC17
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2335
- CGC Family ID: CGCFAM_00636
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2335_19 | HRGMv2_2335_19_9 | 9862 | 10461 | - | 2.A.115.2.14 |
| TC | HRGMv2_2335_19 | HRGMv2_2335_19_10 | 10483 | 11841 | - | 2.A.45.2.2 |
| CAZyme | HRGMv2_2335_19 | HRGMv2_2335_19_11 | 12084 | 14897 | - | GH3 |
| TC | HRGMv2_2335_19 | HRGMv2_2335_19_12 | 14966 | 18007 | - | 9.B.34.1.1 |
Gene ID: HRGMv2_2335_19_9
Type: TC
Location: 9862 - 10461 (-)
Type: TC
Location: 9862 - 10461 (-)
Gene ID: HRGMv2_2335_19_10
Type: TC
Location: 10483 - 11841 (-)
Type: TC
Location: 10483 - 11841 (-)
Gene ID: HRGMv2_2335_19_11
Type: CAZyme
Location: 12084 - 14897 (-)
Type: CAZyme
Location: 12084 - 14897 (-)
Gene ID: HRGMv2_2335_19_12
Type: TC
Location: 14966 - 18007 (-)
Type: TC
Location: 14966 - 18007 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor sp934436435
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.