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Cluster: HRGMv2_2335_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2335_15 HRGMv2_2335_15_14 13433 14752 + 3.D.6.1.2
TC HRGMv2_2335_15 HRGMv2_2335_15_15 14765 15706 + 3.D.6.1.2
TC HRGMv2_2335_15 HRGMv2_2335_15_16 15696 16322 + 3.D.6.1.2
TC HRGMv2_2335_15 HRGMv2_2335_15_17 16315 17112 + 3.D.6.1.2
TC HRGMv2_2335_15 HRGMv2_2335_15_18 17113 17697 + 3.D.6.1.2
TC HRGMv2_2335_15 HRGMv2_2335_15_19 17715 18512 + 3.D.6.1.2
CAZyme HRGMv2_2335_15 HRGMv2_2335_15_20 18538 19659 + GH25
Gene ID: HRGMv2_2335_15_14
Type: TC
Location: 13433 - 14752 (+)
Gene ID: HRGMv2_2335_15_15
Type: TC
Location: 14765 - 15706 (+)
Gene ID: HRGMv2_2335_15_16
Type: TC
Location: 15696 - 16322 (+)
Gene ID: HRGMv2_2335_15_17
Type: TC
Location: 16315 - 17112 (+)
Gene ID: HRGMv2_2335_15_18
Type: TC
Location: 17113 - 17697 (+)
Gene ID: HRGMv2_2335_15_19
Type: TC
Location: 17715 - 18512 (+)
Gene ID: HRGMv2_2335_15_20
Type: CAZyme
Location: 18538 - 19659 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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