Cluster: HRGMv2_2335_CGC1
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2335
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2335_1 | HRGMv2_2335_1_11 | 11712 | 14834 | - | CBM35inCE17 | CE17 |
| CAZyme | HRGMv2_2335_1 | HRGMv2_2335_1_12 | 14853 | 15875 | - | GH130_2 |
| CAZyme | HRGMv2_2335_1 | HRGMv2_2335_1_13 | 15897 | 17072 | - | GH130_1 |
| pfam | HRGMv2_2335_1 | HRGMv2_2335_1_14 | 17066 | 18250 | - | GlcNAc_2-epim |
| TC | HRGMv2_2335_1 | HRGMv2_2335_1_15 | 18266 | 19132 | - | 3.A.1.1.47 |
| TC | HRGMv2_2335_1 | HRGMv2_2335_1_16 | 19134 | 20144 | - | 3.A.1.1.20 |
Gene ID: HRGMv2_2335_1_11
Type: CAZyme
Location: 11712 - 14834 (-)
Type: CAZyme
Location: 11712 - 14834 (-)
Gene ID: HRGMv2_2335_1_12
Type: CAZyme
Location: 14853 - 15875 (-)
Type: CAZyme
Location: 14853 - 15875 (-)
Gene ID: HRGMv2_2335_1_13
Type: CAZyme
Location: 15897 - 17072 (-)
Type: CAZyme
Location: 15897 - 17072 (-)
Gene ID: HRGMv2_2335_1_14
Type: pfam
Location: 17066 - 18250 (-)
Type: pfam
Location: 17066 - 18250 (-)
Gene ID: HRGMv2_2335_1_15
Type: TC
Location: 18266 - 19132 (-)
Type: TC
Location: 18266 - 19132 (-)
Gene ID: HRGMv2_2335_1_16
Type: TC
Location: 19134 - 20144 (-)
Type: TC
Location: 19134 - 20144 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor sp934436435
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.