Cluster: HRGMv2_2331_CGC8
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2331
- CGC Family ID: CGCFAM_01759
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2331_2 | HRGMv2_2331_2_299 | 307978 | 309744 | + | 3.A.2.3.1 |
| TC | HRGMv2_2331_2 | HRGMv2_2331_2_300 | 309756 | 311180 | + | 3.A.2.3.3 |
| TC | HRGMv2_2331_2 | HRGMv2_2331_2_301 | 311183 | 311800 | + | 3.A.2.3.2 |
| pfam | HRGMv2_2331_2 | HRGMv2_2331_2_302 | 311800 | 312486 | + | Lit |
| CAZyme | HRGMv2_2331_2 | HRGMv2_2331_2_303 | 312600 | 314276 | + | GH13_31 |
Gene ID: HRGMv2_2331_2_299
Type: TC
Location: 307978 - 309744 (+)
Type: TC
Location: 307978 - 309744 (+)
Gene ID: HRGMv2_2331_2_300
Type: TC
Location: 309756 - 311180 (+)
Type: TC
Location: 309756 - 311180 (+)
Gene ID: HRGMv2_2331_2_301
Type: TC
Location: 311183 - 311800 (+)
Type: TC
Location: 311183 - 311800 (+)
Gene ID: HRGMv2_2331_2_302
Type: pfam
Location: 311800 - 312486 (+)
Type: pfam
Location: 311800 - 312486 (+)
Gene ID: HRGMv2_2331_2_303
Type: CAZyme
Location: 312600 - 314276 (+)
Type: CAZyme
Location: 312600 - 314276 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoanaerobaculum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.