Cluster: HRGMv2_2331_CGC5
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2331
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2331_2 | HRGMv2_2331_2_164 | 166349 | 168148 | - | GH43_32 |
| TC | HRGMv2_2331_2 | HRGMv2_2331_2_165 | 168152 | 168952 | - | 3.A.1.1.36 |
| TC | HRGMv2_2331_2 | HRGMv2_2331_2_166 | 168958 | 169830 | - | 3.A.1.1.37 |
| TF | HRGMv2_2331_2 | HRGMv2_2331_2_167 | 169899 | 171440 | - | HTH_AraC |
| TC | HRGMv2_2331_2 | HRGMv2_2331_2_168 | 171437 | 173146 | - | 9.B.33.1.1 |
Gene ID: HRGMv2_2331_2_164
Type: CAZyme
Location: 166349 - 168148 (-)
Type: CAZyme
Location: 166349 - 168148 (-)
Gene ID: HRGMv2_2331_2_165
Type: TC
Location: 168152 - 168952 (-)
Type: TC
Location: 168152 - 168952 (-)
Gene ID: HRGMv2_2331_2_166
Type: TC
Location: 168958 - 169830 (-)
Type: TC
Location: 168958 - 169830 (-)
Gene ID: HRGMv2_2331_2_167
Type: TF
Location: 169899 - 171440 (-)
Type: TF
Location: 169899 - 171440 (-)
Gene ID: HRGMv2_2331_2_168
Type: TC
Location: 171437 - 173146 (-)
Type: TC
Location: 171437 - 173146 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoanaerobaculum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.