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Cluster: HRGMv2_2331_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2331_22 HRGMv2_2331_22_5 4784 5512 + 3.A.2.1.5
TC HRGMv2_2331_22 HRGMv2_2331_22_6 5587 5844 + 3.A.2.1.5
pfam HRGMv2_2331_22 HRGMv2_2331_22_7 5857 6372 + ATP-synt_B
TC HRGMv2_2331_22 HRGMv2_2331_22_8 6360 6893 + 3.A.2.1.3
TC HRGMv2_2331_22 HRGMv2_2331_22_9 6939 8438 + 3.A.2.1.5
TC HRGMv2_2331_22 HRGMv2_2331_22_10 8451 9317 + 3.A.2.1.5
TC HRGMv2_2331_22 HRGMv2_2331_22_11 9341 10732 + 3.A.2.1.5
TC HRGMv2_2331_22 HRGMv2_2331_22_12 10741 11142 + 3.A.2.1.1
CAZyme HRGMv2_2331_22 HRGMv2_2331_22_13 11275 12174 + GT2
Gene ID: HRGMv2_2331_22_5
Type: TC
Location: 4784 - 5512 (+)
Gene ID: HRGMv2_2331_22_6
Type: TC
Location: 5587 - 5844 (+)
Gene ID: HRGMv2_2331_22_7
Type: pfam
Location: 5857 - 6372 (+)
Gene ID: HRGMv2_2331_22_8
Type: TC
Location: 6360 - 6893 (+)
Gene ID: HRGMv2_2331_22_9
Type: TC
Location: 6939 - 8438 (+)
Gene ID: HRGMv2_2331_22_10
Type: TC
Location: 8451 - 9317 (+)
Gene ID: HRGMv2_2331_22_11
Type: TC
Location: 9341 - 10732 (+)
Gene ID: HRGMv2_2331_22_12
Type: TC
Location: 10741 - 11142 (+)
Gene ID: HRGMv2_2331_22_13
Type: CAZyme
Location: 11275 - 12174 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2331_22_6 vegetarian > omnivore 1.32573 0.03723

🧭 Explore Read Mapping of CGC

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