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Cluster: HRGMv2_2331_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2331_16 HRGMv2_2331_16_24 20709 22055 + 2.A.22.5.2
TF HRGMv2_2331_16 HRGMv2_2331_16_25 22222 23253 + 0043758
TC HRGMv2_2331_16 HRGMv2_2331_16_26 23243 23878 + 3.A.8.1.1
TC HRGMv2_2331_16 HRGMv2_2331_16_27 23958 25826 + 1.A.33.1.4
pfam HRGMv2_2331_16 HRGMv2_2331_16_28 25842 26951 + DnaJ | DnaJ_CXXCXGXG | DnaJ_C
pfam HRGMv2_2331_16 HRGMv2_2331_16_29 27093 27644 + dTDP_sugar_isom
TC HRGMv2_2331_16 HRGMv2_2331_16_30 27668 28477 + 3.A.1.104.1
TC HRGMv2_2331_16 HRGMv2_2331_16_31 28486 29814 + 3.A.1.103.6
CAZyme HRGMv2_2331_16 HRGMv2_2331_16_32 29826 33539 + GT2
NULL(UNKNOWN) HRGMv2_2331_16 HRGMv2_2331_16_33 33558 33734 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2331_16 HRGMv2_2331_16_34 33739 35001 + 3.A.23.1.1
Gene ID: HRGMv2_2331_16_24
Type: TC
Location: 20709 - 22055 (+)
Gene ID: HRGMv2_2331_16_25
Type: TF
Location: 22222 - 23253 (+)
Gene ID: HRGMv2_2331_16_26
Type: TC
Location: 23243 - 23878 (+)
Gene ID: HRGMv2_2331_16_27
Type: TC
Location: 23958 - 25826 (+)
Gene ID: HRGMv2_2331_16_28
Type: pfam
Location: 25842 - 26951 (+)
Gene ID: HRGMv2_2331_16_29
Type: pfam
Location: 27093 - 27644 (+)
Gene ID: HRGMv2_2331_16_30
Type: TC
Location: 27668 - 28477 (+)
Gene ID: HRGMv2_2331_16_31
Type: TC
Location: 28486 - 29814 (+)
Gene ID: HRGMv2_2331_16_32
Type: CAZyme
Location: 29826 - 33539 (+)
Gene ID: HRGMv2_2331_16_33
Type:
Location: 33558 - 33734 (+)
Gene ID: HRGMv2_2331_16_34
Type: TC
Location: 33739 - 35001 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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