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Cluster: HRGMv2_2331_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2331_14 HRGMv2_2331_14_27 28508 29533 - CE8
CAZyme HRGMv2_2331_14 HRGMv2_2331_14_28 29530 31110 - GH28
CAZyme HRGMv2_2331_14 HRGMv2_2331_14_29 31103 32254 - GH105
TC HRGMv2_2331_14 HRGMv2_2331_14_30 32256 33113 - 3.A.1.1.11
TC HRGMv2_2331_14 HRGMv2_2331_14_31 33116 34012 - 3.A.1.1.11
TC HRGMv2_2331_14 HRGMv2_2331_14_32 34087 35436 - 3.A.1.1.11
pfam HRGMv2_2331_14 HRGMv2_2331_14_33 35455 36831 - MatE | MatE
TF HRGMv2_2331_14 HRGMv2_2331_14_34 36983 37834 + HTH_AraC | HTH_AraC
TC HRGMv2_2331_14 HRGMv2_2331_14_35 37949 39526 + 1.A.13.2.3
CAZyme HRGMv2_2331_14 HRGMv2_2331_14_36 39586 41295 - GH13_18
Gene ID: HRGMv2_2331_14_27
Type: CAZyme
Location: 28508 - 29533 (-)
Gene ID: HRGMv2_2331_14_28
Type: CAZyme
Location: 29530 - 31110 (-)
Gene ID: HRGMv2_2331_14_29
Type: CAZyme
Location: 31103 - 32254 (-)
Gene ID: HRGMv2_2331_14_30
Type: TC
Location: 32256 - 33113 (-)
Gene ID: HRGMv2_2331_14_31
Type: TC
Location: 33116 - 34012 (-)
Gene ID: HRGMv2_2331_14_32
Type: TC
Location: 34087 - 35436 (-)
Gene ID: HRGMv2_2331_14_33
Type: pfam
Location: 35455 - 36831 (-)
Gene ID: HRGMv2_2331_14_34
Type: TF
Location: 36983 - 37834 (+)
Gene ID: HRGMv2_2331_14_35
Type: TC
Location: 37949 - 39526 (+)
Gene ID: HRGMv2_2331_14_36
Type: CAZyme
Location: 39586 - 41295 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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