Cluster: HRGMv2_2331_CGC25
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2331
- CGC Family ID: CGCFAM_02654
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2331_11 | HRGMv2_2331_11_56 | 62371 | 63126 | - | 3.A.1.3.24 |
| TC | HRGMv2_2331_11 | HRGMv2_2331_11_57 | 63133 | 63783 | - | 3.A.1.3.14 |
| TC | HRGMv2_2331_11 | HRGMv2_2331_11_58 | 63850 | 64689 | - | 3.A.1.3.5 |
| pfam | HRGMv2_2331_11 | HRGMv2_2331_11_59 | 64782 | 65762 | - | MS_channel_2nd | MS_channel_3rd | MS_channel_1st |
| CAZyme | HRGMv2_2331_11 | HRGMv2_2331_11_60 | 65762 | 68005 | - | CBM48 | GH13_9 |
Gene ID: HRGMv2_2331_11_56
Type: TC
Location: 62371 - 63126 (-)
Type: TC
Location: 62371 - 63126 (-)
Gene ID: HRGMv2_2331_11_57
Type: TC
Location: 63133 - 63783 (-)
Type: TC
Location: 63133 - 63783 (-)
Gene ID: HRGMv2_2331_11_58
Type: TC
Location: 63850 - 64689 (-)
Type: TC
Location: 63850 - 64689 (-)
Gene ID: HRGMv2_2331_11_59
Type: pfam
Location: 64782 - 65762 (-)
Type: pfam
Location: 64782 - 65762 (-)
Gene ID: HRGMv2_2331_11_60
Type: CAZyme
Location: 65762 - 68005 (-)
Type: CAZyme
Location: 65762 - 68005 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoanaerobaculum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.