Cluster: HRGMv2_2331_CGC22
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2331
- CGC Family ID: CGCFAM_08492
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2331_9 | HRGMv2_2331_9_52 | 59780 | 61108 | + | 3.A.1.1.20 |
| TC | HRGMv2_2331_9 | HRGMv2_2331_9_53 | 61238 | 62146 | + | 3.A.1.1.41 |
| TC | HRGMv2_2331_9 | HRGMv2_2331_9_54 | 62160 | 63044 | + | 3.A.1.1.18 |
| sulfatase | HRGMv2_2331_9 | HRGMv2_2331_9_55 | 63059 | 64462 | + | S1_27 |
| CAZyme | HRGMv2_2331_9 | HRGMv2_2331_9_56 | 64459 | 66465 | + | PL12_1 |
| CAZyme | HRGMv2_2331_9 | HRGMv2_2331_9_57 | 66487 | 67692 | + | GH88 |
Gene ID: HRGMv2_2331_9_52
Type: TC
Location: 59780 - 61108 (+)
Type: TC
Location: 59780 - 61108 (+)
Gene ID: HRGMv2_2331_9_53
Type: TC
Location: 61238 - 62146 (+)
Type: TC
Location: 61238 - 62146 (+)
Gene ID: HRGMv2_2331_9_54
Type: TC
Location: 62160 - 63044 (+)
Type: TC
Location: 62160 - 63044 (+)
Gene ID: HRGMv2_2331_9_55
Type: sulfatase
Location: 63059 - 64462 (+)
Type: sulfatase
Location: 63059 - 64462 (+)
Gene ID: HRGMv2_2331_9_56
Type: CAZyme
Location: 64459 - 66465 (+)
Type: CAZyme
Location: 64459 - 66465 (+)
Gene ID: HRGMv2_2331_9_57
Type: CAZyme
Location: 66487 - 67692 (+)
Type: CAZyme
Location: 66487 - 67692 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoanaerobaculum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.