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Cluster: HRGMv2_2331_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2331_9 HRGMv2_2331_9_24 26586 27932 + 3.D.6.1.2
TC HRGMv2_2331_9 HRGMv2_2331_9_25 27932 28891 + 3.D.6.1.2
TC HRGMv2_2331_9 HRGMv2_2331_9_26 28888 29499 + 3.D.6.1.2
TC HRGMv2_2331_9 HRGMv2_2331_9_27 29509 30330 + 3.D.6.1.2
TC HRGMv2_2331_9 HRGMv2_2331_9_28 30330 30908 + 3.D.6.1.2
TC HRGMv2_2331_9 HRGMv2_2331_9_29 30919 31734 + 3.D.6.1.2
TC HRGMv2_2331_9 HRGMv2_2331_9_30 32325 33053 + 9.B.120.1.1
pfam HRGMv2_2331_9 HRGMv2_2331_9_31 33352 36465 + tRNA-synt_1 | Anticodon_1 | tRNA-synt_1g | tRNA-synt_1g | DUF5915
CAZyme HRGMv2_2331_9 HRGMv2_2331_9_32 36477 38933 + GT35
Gene ID: HRGMv2_2331_9_24
Type: TC
Location: 26586 - 27932 (+)
Gene ID: HRGMv2_2331_9_25
Type: TC
Location: 27932 - 28891 (+)
Gene ID: HRGMv2_2331_9_26
Type: TC
Location: 28888 - 29499 (+)
Gene ID: HRGMv2_2331_9_27
Type: TC
Location: 29509 - 30330 (+)
Gene ID: HRGMv2_2331_9_28
Type: TC
Location: 30330 - 30908 (+)
Gene ID: HRGMv2_2331_9_29
Type: TC
Location: 30919 - 31734 (+)
Gene ID: HRGMv2_2331_9_30
Type: TC
Location: 32325 - 33053 (+)
Gene ID: HRGMv2_2331_9_31
Type: pfam
Location: 33352 - 36465 (+)
Gene ID: HRGMv2_2331_9_32
Type: CAZyme
Location: 36477 - 38933 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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