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Cluster: HRGMv2_2331_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2331_7 HRGMv2_2331_7_81 81280 82479 + 3.A.1.2.5
TC HRGMv2_2331_7 HRGMv2_2331_7_82 82531 84132 + 3.A.1.2.5
TC HRGMv2_2331_7 HRGMv2_2331_7_83 84143 85300 + 3.A.1.2.5
STP HRGMv2_2331_7 HRGMv2_2331_7_84 85367 86536 + Aminotran_1_2
TC HRGMv2_2331_7 HRGMv2_2331_7_85 86529 87941 + 2.A.35.1.3
pfam HRGMv2_2331_7 HRGMv2_2331_7_86 88063 88458 + Asp23
TC HRGMv2_2331_7 HRGMv2_2331_7_87 88458 88967 + 2.A.87.3.3
TC HRGMv2_2331_7 HRGMv2_2331_7_88 89049 90218 + 9.B.10.1.1
pfam HRGMv2_2331_7 HRGMv2_2331_7_89 90240 91181 + cobW | DUF1980_C
pfam HRGMv2_2331_7 HRGMv2_2331_7_90 91189 91602 + dCMP_cyt_deam_1 | dCMP_cyt_deam_2
CAZyme HRGMv2_2331_7 HRGMv2_2331_7_91 91623 93392 + GH73
Gene ID: HRGMv2_2331_7_81
Type: TC
Location: 81280 - 82479 (+)
Gene ID: HRGMv2_2331_7_82
Type: TC
Location: 82531 - 84132 (+)
Gene ID: HRGMv2_2331_7_83
Type: TC
Location: 84143 - 85300 (+)
Gene ID: HRGMv2_2331_7_84
Type: STP
Location: 85367 - 86536 (+)
Gene ID: HRGMv2_2331_7_85
Type: TC
Location: 86529 - 87941 (+)
Gene ID: HRGMv2_2331_7_86
Type: pfam
Location: 88063 - 88458 (+)
Gene ID: HRGMv2_2331_7_87
Type: TC
Location: 88458 - 88967 (+)
Gene ID: HRGMv2_2331_7_88
Type: TC
Location: 89049 - 90218 (+)
Gene ID: HRGMv2_2331_7_89
Type: pfam
Location: 90240 - 91181 (+)
Gene ID: HRGMv2_2331_7_90
Type: pfam
Location: 91189 - 91602 (+)
Gene ID: HRGMv2_2331_7_91
Type: CAZyme
Location: 91623 - 93392 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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