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Cluster: HRGMv2_2331_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2331_7 HRGMv2_2331_7_24 21503 22849 - 2.A.66.1.47
peptidase HRGMv2_2331_7 HRGMv2_2331_7_25 23091 24254 + C110.UPW
NULL(UNKNOWN) HRGMv2_2331_7 HRGMv2_2331_7_26 24320 24844 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2331_7 HRGMv2_2331_7_27 25055 25909 + 3.A.1.26.7
TC HRGMv2_2331_7 HRGMv2_2331_7_28 25928 26812 + 3.A.1.26.7
TC HRGMv2_2331_7 HRGMv2_2331_7_29 26805 27611 + 3.A.1.25.4
pfam HRGMv2_2331_7 HRGMv2_2331_7_30 27616 28353 + PseudoU_synth_1 | PseudoU_synth_1
pfam HRGMv2_2331_7 HRGMv2_2331_7_31 28509 29081 + YcxB
TC HRGMv2_2331_7 HRGMv2_2331_7_32 29155 30177 + 2.A.56.1.5
TC HRGMv2_2331_7 HRGMv2_2331_7_33 30186 30662 + 2.A.56.1.5
TC HRGMv2_2331_7 HRGMv2_2331_7_34 30663 31982 + 2.A.56.1.5
CAZyme HRGMv2_2331_7 HRGMv2_2331_7_35 31994 34486 + GH31_2
CAZyme HRGMv2_2331_7 HRGMv2_2331_7_36 34487 37003 + GH31_2
Gene ID: HRGMv2_2331_7_24
Type: TC
Location: 21503 - 22849 (-)
Gene ID: HRGMv2_2331_7_25
Type: peptidase
Location: 23091 - 24254 (+)
Gene ID: HRGMv2_2331_7_26
Type:
Location: 24320 - 24844 (+)
Gene ID: HRGMv2_2331_7_27
Type: TC
Location: 25055 - 25909 (+)
Gene ID: HRGMv2_2331_7_28
Type: TC
Location: 25928 - 26812 (+)
Gene ID: HRGMv2_2331_7_29
Type: TC
Location: 26805 - 27611 (+)
Gene ID: HRGMv2_2331_7_30
Type: pfam
Location: 27616 - 28353 (+)
Gene ID: HRGMv2_2331_7_31
Type: pfam
Location: 28509 - 29081 (+)
Gene ID: HRGMv2_2331_7_32
Type: TC
Location: 29155 - 30177 (+)
Gene ID: HRGMv2_2331_7_33
Type: TC
Location: 30186 - 30662 (+)
Gene ID: HRGMv2_2331_7_34
Type: TC
Location: 30663 - 31982 (+)
Gene ID: HRGMv2_2331_7_35
Type: CAZyme
Location: 31994 - 34486 (+)
Gene ID: HRGMv2_2331_7_36
Type: CAZyme
Location: 34487 - 37003 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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