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Cluster: HRGMv2_2331_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2331_6 HRGMv2_2331_6_93 104791 106443 + 2.A.53.3.11
pfam HRGMv2_2331_6 HRGMv2_2331_6_94 106609 107235 + LUD_dom
STP HRGMv2_2331_6 HRGMv2_2331_6_95 107701 109029 + SBP_bac_1
TC HRGMv2_2331_6 HRGMv2_2331_6_96 109095 109994 + 3.A.1.1.20
TC HRGMv2_2331_6 HRGMv2_2331_6_97 110003 110848 + 3.A.1.1.20
TF HRGMv2_2331_6 HRGMv2_2331_6_98 110880 111875 + LacI
CAZyme HRGMv2_2331_6 HRGMv2_2331_6_99 111877 113307 + GH32
pfam HRGMv2_2331_6 HRGMv2_2331_6_100 113476 114663 + Flavodoxin_1 | Lactamase_B | Lactamase_B_2 | ODP
pfam HRGMv2_2331_6 HRGMv2_2331_6_101 114808 116151 + CAP | Choline_bind_2 | Choline_bind_2
TC HRGMv2_2331_6 HRGMv2_2331_6_102 116230 117402 + 3.A.11.1.4
Gene ID: HRGMv2_2331_6_93
Type: TC
Location: 104791 - 106443 (+)
Gene ID: HRGMv2_2331_6_94
Type: pfam
Location: 106609 - 107235 (+)
Gene ID: HRGMv2_2331_6_95
Type: STP
Location: 107701 - 109029 (+)
Gene ID: HRGMv2_2331_6_96
Type: TC
Location: 109095 - 109994 (+)
Gene ID: HRGMv2_2331_6_97
Type: TC
Location: 110003 - 110848 (+)
Gene ID: HRGMv2_2331_6_98
Type: TF
Location: 110880 - 111875 (+)
Gene ID: HRGMv2_2331_6_99
Type: CAZyme
Location: 111877 - 113307 (+)
Gene ID: HRGMv2_2331_6_100
Type: pfam
Location: 113476 - 114663 (+)
Gene ID: HRGMv2_2331_6_101
Type: pfam
Location: 114808 - 116151 (+)
Gene ID: HRGMv2_2331_6_102
Type: TC
Location: 116230 - 117402 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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