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Cluster: HRGMv2_2331_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2331_4 HRGMv2_2331_4_3 2163 3266 - GH170
TC HRGMv2_2331_4 HRGMv2_2331_4_4 3290 4639 - 4.A.3.2.6
pfam HRGMv2_2331_4 HRGMv2_2331_4_5 4641 4952 - PTS_IIB
STP HRGMv2_2331_4 HRGMv2_2331_4_6 5073 5987 - SIS
CAZyme HRGMv2_2331_4 HRGMv2_2331_4_7 5974 7419 - GH1
TF HRGMv2_2331_4 HRGMv2_2331_4_8 7441 8283 - HTH_6
TC HRGMv2_2331_4 HRGMv2_2331_4_9 8310 8663 - 4.A.3.2.9
NULL(UNKNOWN) HRGMv2_2331_4 HRGMv2_2331_4_10 9268 9549 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_2331_4 HRGMv2_2331_4_11 9546 10118 - Acetyltransf_1 | Acetyltransf_4 | Acetyltransf_7
TC HRGMv2_2331_4 HRGMv2_2331_4_12 10111 10809 - 2.A.38.4.6
TC HRGMv2_2331_4 HRGMv2_2331_4_13 10871 12232 - 2.A.38.4.1
TC HRGMv2_2331_4 HRGMv2_2331_4_14 12268 13683 - 3.B.1.1.6
TC HRGMv2_2331_4 HRGMv2_2331_4_15 13693 14844 - 3.B.1.1.3
TC HRGMv2_2331_4 HRGMv2_2331_4_16 14861 15223 - 3.B.1.1.2
pfam HRGMv2_2331_4 HRGMv2_2331_4_17 15235 15966 - OAD_gamma
TC HRGMv2_2331_4 HRGMv2_2331_4_18 15976 17427 - 3.B.1.1.5
Gene ID: HRGMv2_2331_4_3
Type: CAZyme
Location: 2163 - 3266 (-)
Gene ID: HRGMv2_2331_4_4
Type: TC
Location: 3290 - 4639 (-)
Gene ID: HRGMv2_2331_4_5
Type: pfam
Location: 4641 - 4952 (-)
Gene ID: HRGMv2_2331_4_6
Type: STP
Location: 5073 - 5987 (-)
Gene ID: HRGMv2_2331_4_7
Type: CAZyme
Location: 5974 - 7419 (-)
Gene ID: HRGMv2_2331_4_8
Type: TF
Location: 7441 - 8283 (-)
Gene ID: HRGMv2_2331_4_9
Type: TC
Location: 8310 - 8663 (-)
Gene ID: HRGMv2_2331_4_10
Type:
Location: 9268 - 9549 (+)
Gene ID: HRGMv2_2331_4_11
Type: pfam
Location: 9546 - 10118 (-)
Gene ID: HRGMv2_2331_4_12
Type: TC
Location: 10111 - 10809 (-)
Gene ID: HRGMv2_2331_4_13
Type: TC
Location: 10871 - 12232 (-)
Gene ID: HRGMv2_2331_4_14
Type: TC
Location: 12268 - 13683 (-)
Gene ID: HRGMv2_2331_4_15
Type: TC
Location: 13693 - 14844 (-)
Gene ID: HRGMv2_2331_4_16
Type: TC
Location: 14861 - 15223 (-)
Gene ID: HRGMv2_2331_4_17
Type: pfam
Location: 15235 - 15966 (-)
Gene ID: HRGMv2_2331_4_18
Type: TC
Location: 15976 - 17427 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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