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Cluster: HRGMv2_2331_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2331_3 HRGMv2_2331_3_212 245423 247210 - 8.A.59.2.1
STP HRGMv2_2331_3 HRGMv2_2331_3_213 247378 248637 + SBP_bac_1
TC HRGMv2_2331_3 HRGMv2_2331_3_214 248723 249601 + 3.A.1.1.41
TC HRGMv2_2331_3 HRGMv2_2331_3_215 249616 250470 + 3.A.1.1.17
CAZyme HRGMv2_2331_3 HRGMv2_2331_3_216 250492 251598 + GH172
STP HRGMv2_2331_3 HRGMv2_2331_3_217 251655 252845 + SBP_bac_1
TC HRGMv2_2331_3 HRGMv2_2331_3_218 252910 253617 - 1.C.113.1.3
Gene ID: HRGMv2_2331_3_212
Type: TC
Location: 245423 - 247210 (-)
Gene ID: HRGMv2_2331_3_213
Type: STP
Location: 247378 - 248637 (+)
Gene ID: HRGMv2_2331_3_214
Type: TC
Location: 248723 - 249601 (+)
Gene ID: HRGMv2_2331_3_215
Type: TC
Location: 249616 - 250470 (+)
Gene ID: HRGMv2_2331_3_216
Type: CAZyme
Location: 250492 - 251598 (+)
Gene ID: HRGMv2_2331_3_217
Type: STP
Location: 251655 - 252845 (+)
Gene ID: HRGMv2_2331_3_218
Type: TC
Location: 252910 - 253617 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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