Cluster: HRGMv2_2330_CGC7
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2330
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2330_8 | HRGMv2_2330_8_3 | 2282 | 4723 | - | 3.A.9.1.2 |
| pfam | HRGMv2_2330_8 | HRGMv2_2330_8_4 | 4748 | 6910 | - | Cadherin-like |
| CAZyme | HRGMv2_2330_8 | HRGMv2_2330_8_5 | 6932 | 8689 | - | GH73 |
| CAZyme | HRGMv2_2330_8 | HRGMv2_2330_8_6 | 8787 | 9731 | - | GT2 |
Gene ID: HRGMv2_2330_8_3
Type: TC
Location: 2282 - 4723 (-)
Type: TC
Location: 2282 - 4723 (-)
Gene ID: HRGMv2_2330_8_4
Type: pfam
Location: 4748 - 6910 (-)
Type: pfam
Location: 4748 - 6910 (-)
Gene ID: HRGMv2_2330_8_5
Type: CAZyme
Location: 6932 - 8689 (-)
Type: CAZyme
Location: 6932 - 8689 (-)
Gene ID: HRGMv2_2330_8_6
Type: CAZyme
Location: 8787 - 9731 (-)
Type: CAZyme
Location: 8787 - 9731 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Species
Agathobacter sp934316545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.