Cluster: HRGMv2_2330_CGC6
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2330
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2330_6 | HRGMv2_2330_6_43 | 49700 | 50329 | + | 9.B.104.1.3 |
| pfam | HRGMv2_2330_6 | HRGMv2_2330_6_44 | 50356 | 51345 | + | SCP2 |
| pfam | HRGMv2_2330_6 | HRGMv2_2330_6_45 | 51433 | 51843 | + | HIT | DcpS_C |
| CAZyme | HRGMv2_2330_6 | HRGMv2_2330_6_46 | 51922 | 52998 | - | GT28 |
Gene ID: HRGMv2_2330_6_43
Type: TC
Location: 49700 - 50329 (+)
Type: TC
Location: 49700 - 50329 (+)
Gene ID: HRGMv2_2330_6_44
Type: pfam
Location: 50356 - 51345 (+)
Type: pfam
Location: 50356 - 51345 (+)
Gene ID: HRGMv2_2330_6_45
Type: pfam
Location: 51433 - 51843 (+)
Type: pfam
Location: 51433 - 51843 (+)
Gene ID: HRGMv2_2330_6_46
Type: CAZyme
Location: 51922 - 52998 (-)
Type: CAZyme
Location: 51922 - 52998 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Species
Agathobacter sp934316545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.