Cluster: HRGMv2_2330_CGC5
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2330
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2330_6 | HRGMv2_2330_6_20 | 22699 | 24063 | + | 2.A.86.1.8 |
| NULL(UNKNOWN) | HRGMv2_2330_6 | HRGMv2_2330_6_21 | 24217 | 26667 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2330_6 | HRGMv2_2330_6_22 | 26692 | 28596 | + | CBM48 | GH13_9 |
| pfam | HRGMv2_2330_6 | HRGMv2_2330_6_23 | 28811 | 31837 | + | DUF6240 | DUF6240 |
| pfam | HRGMv2_2330_6 | HRGMv2_2330_6_24 | 31806 | 32513 | - | Amidase_3 |
| CAZyme | HRGMv2_2330_6 | HRGMv2_2330_6_25 | 32599 | 34329 | - | GH18 |
Gene ID: HRGMv2_2330_6_20
Type: TC
Location: 22699 - 24063 (+)
Type: TC
Location: 22699 - 24063 (+)
Gene ID: HRGMv2_2330_6_21
Type:
Location: 24217 - 26667 (+)
Type:
Location: 24217 - 26667 (+)
Gene ID: HRGMv2_2330_6_22
Type: CAZyme
Location: 26692 - 28596 (+)
Type: CAZyme
Location: 26692 - 28596 (+)
Gene ID: HRGMv2_2330_6_23
Type: pfam
Location: 28811 - 31837 (+)
Type: pfam
Location: 28811 - 31837 (+)
Gene ID: HRGMv2_2330_6_24
Type: pfam
Location: 31806 - 32513 (-)
Type: pfam
Location: 31806 - 32513 (-)
Gene ID: HRGMv2_2330_6_25
Type: CAZyme
Location: 32599 - 34329 (-)
Type: CAZyme
Location: 32599 - 34329 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Species
Agathobacter sp934316545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.