Cluster: HRGMv2_2330_CGC30
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2330
- CGC Family ID: CGCFAM_00493
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2330_74 | HRGMv2_2330_74_7 | 6093 | 6857 | + | 8.A.3.2.2 |
| pfam | HRGMv2_2330_74 | HRGMv2_2330_74_8 | 6939 | 7499 | + | LRR_5 |
| TC | HRGMv2_2330_74 | HRGMv2_2330_74_9 | 7599 | 9050 | + | 9.B.18.1.2 |
| pfam | HRGMv2_2330_74 | HRGMv2_2330_74_10 | 9087 | 10196 | + | Acyl_transf_3 |
| CAZyme | HRGMv2_2330_74 | HRGMv2_2330_74_11 | 10314 | 11132 | + | GT111 |
| CAZyme | HRGMv2_2330_74 | HRGMv2_2330_74_12 | 11136 | 11915 | + | GT2 |
Gene ID: HRGMv2_2330_74_7
Type: TC
Location: 6093 - 6857 (+)
Type: TC
Location: 6093 - 6857 (+)
Gene ID: HRGMv2_2330_74_8
Type: pfam
Location: 6939 - 7499 (+)
Type: pfam
Location: 6939 - 7499 (+)
Gene ID: HRGMv2_2330_74_9
Type: TC
Location: 7599 - 9050 (+)
Type: TC
Location: 7599 - 9050 (+)
Gene ID: HRGMv2_2330_74_10
Type: pfam
Location: 9087 - 10196 (+)
Type: pfam
Location: 9087 - 10196 (+)
Gene ID: HRGMv2_2330_74_11
Type: CAZyme
Location: 10314 - 11132 (+)
Type: CAZyme
Location: 10314 - 11132 (+)
Gene ID: HRGMv2_2330_74_12
Type: CAZyme
Location: 11136 - 11915 (+)
Type: CAZyme
Location: 11136 - 11915 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Species
Agathobacter sp934316545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.