Cluster: HRGMv2_2330_CGC19
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2330
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2330_24 | HRGMv2_2330_24_14 | 15108 | 16082 | + | GH25 |
| TC | HRGMv2_2330_24 | HRGMv2_2330_24_15 | 16160 | 18268 | + | 2.A.53.1.8 |
| TC | HRGMv2_2330_24 | HRGMv2_2330_24_16 | 18309 | 19151 | - | 2.A.115.1.1 |
| TC | HRGMv2_2330_24 | HRGMv2_2330_24_17 | 19293 | 20624 | - | 2.A.66.1.37 |
Gene ID: HRGMv2_2330_24_14
Type: CAZyme
Location: 15108 - 16082 (+)
Type: CAZyme
Location: 15108 - 16082 (+)
Gene ID: HRGMv2_2330_24_15
Type: TC
Location: 16160 - 18268 (+)
Type: TC
Location: 16160 - 18268 (+)
Gene ID: HRGMv2_2330_24_16
Type: TC
Location: 18309 - 19151 (-)
Type: TC
Location: 18309 - 19151 (-)
Gene ID: HRGMv2_2330_24_17
Type: TC
Location: 19293 - 20624 (-)
Type: TC
Location: 19293 - 20624 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Species
Agathobacter sp934316545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.