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Cluster: HRGMv2_2330_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2330_20 HRGMv2_2330_20_1 147 1340 + 8.A.59.4.1
STP HRGMv2_2330_20 HRGMv2_2330_20_2 1353 2522 + HD
TC HRGMv2_2330_20 HRGMv2_2330_20_3 2976 4385 + 1.A.26.1.1
pfam HRGMv2_2330_20 HRGMv2_2330_20_4 4517 5734 + Fe-ADH | Fe-ADH_2 | ADH_Fe_C
CAZyme HRGMv2_2330_20 HRGMv2_2330_20_5 6055 10575 + CBM83 | GH13_41
pfam HRGMv2_2330_20 HRGMv2_2330_20_6 10637 12007 - FAD-depend_C
TC HRGMv2_2330_20 HRGMv2_2330_20_7 12168 13052 - 2.A.4.7.2
STP HRGMv2_2330_20 HRGMv2_2330_20_8 13555 13767 + FeoA
STP HRGMv2_2330_20 HRGMv2_2330_20_9 13886 14104 + FeoA
TC HRGMv2_2330_20 HRGMv2_2330_20_10 14140 16296 + 9.A.8.1.6
Gene ID: HRGMv2_2330_20_1
Type: TC
Location: 147 - 1340 (+)
Gene ID: HRGMv2_2330_20_2
Type: STP
Location: 1353 - 2522 (+)
Gene ID: HRGMv2_2330_20_3
Type: TC
Location: 2976 - 4385 (+)
Gene ID: HRGMv2_2330_20_4
Type: pfam
Location: 4517 - 5734 (+)
Gene ID: HRGMv2_2330_20_5
Type: CAZyme
Location: 6055 - 10575 (+)
Gene ID: HRGMv2_2330_20_6
Type: pfam
Location: 10637 - 12007 (-)
Gene ID: HRGMv2_2330_20_7
Type: TC
Location: 12168 - 13052 (-)
Gene ID: HRGMv2_2330_20_8
Type: STP
Location: 13555 - 13767 (+)
Gene ID: HRGMv2_2330_20_9
Type: STP
Location: 13886 - 14104 (+)
Gene ID: HRGMv2_2330_20_10
Type: TC
Location: 14140 - 16296 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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