Cluster: HRGMv2_2330_CGC14
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2330
- CGC Family ID: CGCFAM_07086
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2330_15 | HRGMv2_2330_15_17 | 15207 | 18965 | - | 2.A.6.3.6 |
| NULL(UNKNOWN) | HRGMv2_2330_15 | HRGMv2_2330_15_18 | 19146 | 19292 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_2330_15 | HRGMv2_2330_15_19 | 19535 | 20737 | - | Bmp |
| TC | HRGMv2_2330_15 | HRGMv2_2330_15_20 | 20734 | 24270 | - | 8.A.59.4.1 |
| STP | HRGMv2_2330_15 | HRGMv2_2330_15_21 | 24305 | 24931 | - | TetR_N |
| CAZyme | HRGMv2_2330_15 | HRGMv2_2330_15_22 | 24991 | 25785 | - | CE4 |
Gene ID: HRGMv2_2330_15_17
Type: TC
Location: 15207 - 18965 (-)
Type: TC
Location: 15207 - 18965 (-)
Gene ID: HRGMv2_2330_15_18
Type:
Location: 19146 - 19292 (-)
Type:
Location: 19146 - 19292 (-)
Gene ID: HRGMv2_2330_15_19
Type: pfam
Location: 19535 - 20737 (-)
Type: pfam
Location: 19535 - 20737 (-)
Gene ID: HRGMv2_2330_15_20
Type: TC
Location: 20734 - 24270 (-)
Type: TC
Location: 20734 - 24270 (-)
Gene ID: HRGMv2_2330_15_21
Type: STP
Location: 24305 - 24931 (-)
Type: STP
Location: 24305 - 24931 (-)
Gene ID: HRGMv2_2330_15_22
Type: CAZyme
Location: 24991 - 25785 (-)
Type: CAZyme
Location: 24991 - 25785 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Species
Agathobacter sp934316545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.