Cluster: HRGMv2_2330_CGC12
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2330
- CGC Family ID: CGCFAM_07085
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2330_14 | HRGMv2_2330_14_1 | 4 | 1164 | - | GT111 |
| NULL(UNKNOWN) | HRGMv2_2330_14 | HRGMv2_2330_14_2 | 1206 | 1862 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_2330_14 | HRGMv2_2330_14_3 | 1862 | 2251 | - | 4HBT | FlK |
| TC | HRGMv2_2330_14 | HRGMv2_2330_14_4 | 2348 | 3700 | - | 2.A.66.1.33 |
Gene ID: HRGMv2_2330_14_1
Type: CAZyme
Location: 4 - 1164 (-)
Type: CAZyme
Location: 4 - 1164 (-)
Gene ID: HRGMv2_2330_14_2
Type:
Location: 1206 - 1862 (-)
Type:
Location: 1206 - 1862 (-)
Gene ID: HRGMv2_2330_14_3
Type: pfam
Location: 1862 - 2251 (-)
Type: pfam
Location: 1862 - 2251 (-)
Gene ID: HRGMv2_2330_14_4
Type: TC
Location: 2348 - 3700 (-)
Type: TC
Location: 2348 - 3700 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Species
Agathobacter sp934316545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.