dbCAN Logo

Cluster: HRGMv2_2330_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2330_10 HRGMv2_2330_10_19 21468 22781 - 3.D.10.1.4
CAZyme HRGMv2_2330_10 HRGMv2_2330_10_20 23050 24675 - GH13_31
TC HRGMv2_2330_10 HRGMv2_2330_10_21 24692 25507 - 3.A.1.1.45
TC HRGMv2_2330_10 HRGMv2_2330_10_22 25507 26376 - 3.A.1.1.45
STP HRGMv2_2330_10 HRGMv2_2330_10_23 26470 27807 - SBP_bac_1
TF HRGMv2_2330_10 HRGMv2_2330_10_24 28071 29024 - LacI
CAZyme HRGMv2_2330_10 HRGMv2_2330_10_25 29086 30099 - GT2
pfam HRGMv2_2330_10 HRGMv2_2330_10_26 30096 31241 - DAO | Amino_oxidase | GLF | NAD_binding_8
STP HRGMv2_2330_10 HRGMv2_2330_10_27 31643 32782 - HhH-GPD
CAZyme HRGMv2_2330_10 HRGMv2_2330_10_28 32941 34248 - GH13_20
Gene ID: HRGMv2_2330_10_19
Type: TC
Location: 21468 - 22781 (-)
Gene ID: HRGMv2_2330_10_20
Type: CAZyme
Location: 23050 - 24675 (-)
Gene ID: HRGMv2_2330_10_21
Type: TC
Location: 24692 - 25507 (-)
Gene ID: HRGMv2_2330_10_22
Type: TC
Location: 25507 - 26376 (-)
Gene ID: HRGMv2_2330_10_23
Type: STP
Location: 26470 - 27807 (-)
Gene ID: HRGMv2_2330_10_24
Type: TF
Location: 28071 - 29024 (-)
Gene ID: HRGMv2_2330_10_25
Type: CAZyme
Location: 29086 - 30099 (-)
Gene ID: HRGMv2_2330_10_26
Type: pfam
Location: 30096 - 31241 (-)
Gene ID: HRGMv2_2330_10_27
Type: STP
Location: 31643 - 32782 (-)
Gene ID: HRGMv2_2330_10_28
Type: CAZyme
Location: 32941 - 34248 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List