Cluster: HRGMv2_2330_CGC1
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2330
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2330_1 | HRGMv2_2330_1_48 | 53065 | 54828 | - | CBM34 | GH13_20 |
| pfam | HRGMv2_2330_1 | HRGMv2_2330_1_49 | 54958 | 56058 | + | Chorismate_synt |
| TC | HRGMv2_2330_1 | HRGMv2_2330_1_50 | 56155 | 57417 | - | 1.B.52.2.1 |
Gene ID: HRGMv2_2330_1_48
Type: CAZyme
Location: 53065 - 54828 (-)
Type: CAZyme
Location: 53065 - 54828 (-)
Gene ID: HRGMv2_2330_1_49
Type: pfam
Location: 54958 - 56058 (+)
Type: pfam
Location: 54958 - 56058 (+)
Gene ID: HRGMv2_2330_1_50
Type: TC
Location: 56155 - 57417 (-)
Type: TC
Location: 56155 - 57417 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Species
Agathobacter sp934316545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.