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Cluster: HRGMv2_2320_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2320_15 HRGMv2_2320_15_5 3694 5025 + 2.A.66.1.37
NULL(UNKNOWN) HRGMv2_2320_15 HRGMv2_2320_15_6 5042 5449 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2320_15 HRGMv2_2320_15_7 5519 7417 - 3.A.1.120.6
NULL(UNKNOWN) HRGMv2_2320_15 HRGMv2_2320_15_8 7625 7876 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_2320_15 HRGMv2_2320_15_9 8107 9231 + Radical_SAM
TC HRGMv2_2320_15 HRGMv2_2320_15_10 9288 14312 - 9.B.34.1.4
pfam HRGMv2_2320_15 HRGMv2_2320_15_11 14566 15261 + Collagen
CAZyme HRGMv2_2320_15 HRGMv2_2320_15_12 15337 16416 + GT2
Gene ID: HRGMv2_2320_15_5
Type: TC
Location: 3694 - 5025 (+)
Gene ID: HRGMv2_2320_15_6
Type:
Location: 5042 - 5449 (+)
Gene ID: HRGMv2_2320_15_7
Type: TC
Location: 5519 - 7417 (-)
Gene ID: HRGMv2_2320_15_8
Type:
Location: 7625 - 7876 (+)
Gene ID: HRGMv2_2320_15_9
Type: pfam
Location: 8107 - 9231 (+)
Gene ID: HRGMv2_2320_15_10
Type: TC
Location: 9288 - 14312 (-)
Gene ID: HRGMv2_2320_15_11
Type: pfam
Location: 14566 - 15261 (+)
Gene ID: HRGMv2_2320_15_12
Type: CAZyme
Location: 15337 - 16416 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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