Cluster: HRGMv2_2320_CGC5
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2320
- CGC Family ID: CGCFAM_00904
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2320_10 | HRGMv2_2320_10_13 | 15516 | 16691 | - | 9.B.174.1.1 |
| pfam | HRGMv2_2320_10 | HRGMv2_2320_10_14 | 16812 | 17537 | - | SIMPL |
| pfam | HRGMv2_2320_10 | HRGMv2_2320_10_15 | 17562 | 18461 | - | FtsX | FtsX_ECD |
| TC | HRGMv2_2320_10 | HRGMv2_2320_10_16 | 18451 | 19134 | - | 3.A.1.140.1 |
| TF | HRGMv2_2320_10 | HRGMv2_2320_10_17 | 19178 | 20305 | - | 0037176 |
| TC | HRGMv2_2320_10 | HRGMv2_2320_10_18 | 20624 | 21481 | - | 2.A.115.1.2 |
| CAZyme | HRGMv2_2320_10 | HRGMv2_2320_10_19 | 21537 | 22262 | - | GT26 |
| CAZyme | HRGMv2_2320_10 | HRGMv2_2320_10_20 | 22280 | 24499 | - | GT4 |
| pfam | HRGMv2_2320_10 | HRGMv2_2320_10_21 | 24524 | 25000 | - | DUF4330 |
| pfam | HRGMv2_2320_10 | HRGMv2_2320_10_22 | 25015 | 25482 | - | DUF4330 |
| CAZyme | HRGMv2_2320_10 | HRGMv2_2320_10_23 | 25493 | 26605 | - | GT4 |
| TC | HRGMv2_2320_10 | HRGMv2_2320_10_24 | 26607 | 28025 | - | 9.B.67.1.1 |
| TC | HRGMv2_2320_10 | HRGMv2_2320_10_25 | 28042 | 29601 | - | 2.A.66.4.5 |
Gene ID: HRGMv2_2320_10_13
Type: TC
Location: 15516 - 16691 (-)
Type: TC
Location: 15516 - 16691 (-)
Gene ID: HRGMv2_2320_10_14
Type: pfam
Location: 16812 - 17537 (-)
Type: pfam
Location: 16812 - 17537 (-)
Gene ID: HRGMv2_2320_10_15
Type: pfam
Location: 17562 - 18461 (-)
Type: pfam
Location: 17562 - 18461 (-)
Gene ID: HRGMv2_2320_10_16
Type: TC
Location: 18451 - 19134 (-)
Type: TC
Location: 18451 - 19134 (-)
Gene ID: HRGMv2_2320_10_17
Type: TF
Location: 19178 - 20305 (-)
Type: TF
Location: 19178 - 20305 (-)
Gene ID: HRGMv2_2320_10_18
Type: TC
Location: 20624 - 21481 (-)
Type: TC
Location: 20624 - 21481 (-)
Gene ID: HRGMv2_2320_10_19
Type: CAZyme
Location: 21537 - 22262 (-)
Type: CAZyme
Location: 21537 - 22262 (-)
Gene ID: HRGMv2_2320_10_20
Type: CAZyme
Location: 22280 - 24499 (-)
Type: CAZyme
Location: 22280 - 24499 (-)
Gene ID: HRGMv2_2320_10_21
Type: pfam
Location: 24524 - 25000 (-)
Type: pfam
Location: 24524 - 25000 (-)
Gene ID: HRGMv2_2320_10_22
Type: pfam
Location: 25015 - 25482 (-)
Type: pfam
Location: 25015 - 25482 (-)
Gene ID: HRGMv2_2320_10_23
Type: CAZyme
Location: 25493 - 26605 (-)
Type: CAZyme
Location: 25493 - 26605 (-)
Gene ID: HRGMv2_2320_10_24
Type: TC
Location: 26607 - 28025 (-)
Type: TC
Location: 26607 - 28025 (-)
Gene ID: HRGMv2_2320_10_25
Type: TC
Location: 28042 - 29601 (-)
Type: TC
Location: 28042 - 29601 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Anaerotignaceae
Genus
Metalachnospira
Species
Metalachnospira sp900548595
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.