Cluster: HRGMv2_2320_CGC12
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2320
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2320_29 | HRGMv2_2320_29_25 | 25877 | 27262 | + | 2.A.22.5.3 |
| pfam | HRGMv2_2320_29 | HRGMv2_2320_29_26 | 27366 | 28733 | + | ATP_bind_3 | TilS | TilS_C |
| STP | HRGMv2_2320_29 | HRGMv2_2320_29_27 | 28737 | 29264 | + | Pribosyltran |
| CAZyme | HRGMv2_2320_29 | HRGMv2_2320_29_28 | 29314 | 30420 | - | GH3 |
| TF | HRGMv2_2320_29 | HRGMv2_2320_29_29 | 30461 | 31162 | - | HTH_3 |
| NULL(UNKNOWN) | HRGMv2_2320_29 | HRGMv2_2320_29_30 | 31491 | 31751 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2320_29 | HRGMv2_2320_29_31 | 32058 | 33956 | + | 3.A.16.1.1 |
Gene ID: HRGMv2_2320_29_25
Type: TC
Location: 25877 - 27262 (+)
Type: TC
Location: 25877 - 27262 (+)
Gene ID: HRGMv2_2320_29_26
Type: pfam
Location: 27366 - 28733 (+)
Type: pfam
Location: 27366 - 28733 (+)
Gene ID: HRGMv2_2320_29_27
Type: STP
Location: 28737 - 29264 (+)
Type: STP
Location: 28737 - 29264 (+)
Gene ID: HRGMv2_2320_29_28
Type: CAZyme
Location: 29314 - 30420 (-)
Type: CAZyme
Location: 29314 - 30420 (-)
Gene ID: HRGMv2_2320_29_29
Type: TF
Location: 30461 - 31162 (-)
Type: TF
Location: 30461 - 31162 (-)
Gene ID: HRGMv2_2320_29_30
Type:
Location: 31491 - 31751 (+)
Type:
Location: 31491 - 31751 (+)
Gene ID: HRGMv2_2320_29_31
Type: TC
Location: 32058 - 33956 (+)
Type: TC
Location: 32058 - 33956 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Anaerotignaceae
Genus
Metalachnospira
Species
Metalachnospira sp900548595
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.